The detailed information of tRNA gene sequence


Sequence ID>SRA1013708
Genome IDSRR023396.406585
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 22
End posion on genome 96
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tttttttttT
tRNA gene sequence 
GCGCCTGTAGTTCAGTGGATAGAACGTCGGCCTCCGGAGCCGAAAGTCGCAGGTTCAAAT
CCTGCCAGGCGCAAaa
Downstream region at tRNA end position 
aaaaattaaa
Secondary structure (Cloverleaf model)
>SRA1013708	Arg	CCG
                   T      AAaa aaaaattaaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    G       C T T G       G C A G G     C
    G       | | | |                 T T
    A       G A A C
      T A          G     AAGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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