The detailed information of tRNA gene sequence


Sequence ID>SRA1013712
Genome IDSRR023396.412401
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 8
End posion on genome 83
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
nnnctcttat
tRNA gene sequence 
GCGCCCGTAGCTCAATGGATAGAGCAGGGGCTTCCTAAGCCCTTGGTTGGAAGTTCGACT
CTTCTCGGGCGTACCA
Downstream region at tRNA end position 
tttttataat
Secondary structure (Cloverleaf model)
>SRA1013712	Arg	CCT
                   t      ACCA tttttataat
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T C T T C     A
      T A A        A      + | | | |     G
    G       C T C G       G G A A G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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