The detailed information of tRNA gene sequence


Sequence ID>SRA1013718
Genome IDSRR023396.421998
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 140
End posion on genome 228
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaagaggtg
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTATGGTGCCGCTCTCGAAAAGCGGTCTCGCCTTTGGCGAG
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
atttagaaat
Secondary structure (Cloverleaf model)
>SRA1013718	Ser	CGA
                   g      GCCA atttagaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      T T A        G     TCTCGCCTTTGGCGAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK