The detailed information of tRNA gene sequence


Sequence ID>SRA1013729
Genome IDSRR023396.439243
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 227
End posion on genome 151
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnnnnggctt
tRNA gene sequence 
GCCGGGGTGGGCCGAGTGGTTCAGGCGGTGGGCTGCAGACCCGCTCTACGTGGGTTCGAT
TCCCACCCCCGGCTCCA
Downstream region at tRNA end position 
atctgcaaaa
Secondary structure (Cloverleaf model)
>SRA1013729	Cys	GCA
                   t      TCCA atctgcaaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A C C C     A
      G A G        G      | | | | |     G
    T       C C G G       G T G G G     C
    G         |   |                 T T
    G       A G G C
      T T C        G     TCTAC
                    G - C
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK