The detailed information of tRNA gene sequence


Sequence ID>SRA1013736
Genome IDSRR023396.454582
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 201
End posion on genome 126
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attagaaaac
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGAAGAGCAACCGGCTCATAACCGGTCGGTCCCTGGTTCGAGT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
aaaaactaat
Secondary structure (Cloverleaf model)
>SRA1013736	Met	CAT
                   c      ACCA aaaaactaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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