The detailed information of tRNA gene sequence


Sequence ID>SRA1013743
Genome IDSRR023396.468761
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 154
End posion on genome 80
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tcattagaac
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTTAGCGCACAGCGTTCGGGACGCTGGGGTCAGGGGTTCGA
ATCCCCTCGCCCCGAttt
Downstream region at tRNA end position 
ttcttttata
Secondary structure (Cloverleaf model)
>SRA1013743	Pro	CGG
                   c      Attt ttcttttata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        G      | | | | |     G
  T         C G C G       A G G G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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