The detailed information of tRNA gene sequence


Sequence ID>SRA1013746
Genome IDSRR023396.470316
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 264
End posion on genome 187
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttcgcaacag
tRNA gene sequence 
GGGCCGGGTCGTCTAGCTCGGTAGGACATTGGCTTTACGAGCCAAAGGTCGCTGGTTCAA
GTCCGGCCCGGCCCACCC
Downstream region at tRNA end position 
ataacaagcc
Secondary structure (Cloverleaf model)
>SRA1013746	Val	TAC
                   g      ACCC ataacaagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    G     C G G C C     A
    C G A T        T      | | + | |     A
  T         C T G C       G C T G G     C
  C         | +                     T T
  G         G G A C
    G T A          A     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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