The detailed information of tRNA gene sequence


Sequence ID>SRA1013765
Genome IDSRR023396.505727
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 2
End posion on genome 78
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGGCCGGTAGTCTAGCTGGTTATGATGTCGCCTTGACGTGGCGAAGATCGGGGGTTCGAA
TCCCTCCTGGCCCACCA
Downstream region at tRNA end position 
cttattaggt
Secondary structure (Cloverleaf model)
>SRA1013765	Val	GAC
                   t      ACCA cttattaggt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G + T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       T C T G       G G G G G     C
    G         | | +                 T T
    G       T G A T
      T T A        G     AGATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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