The detailed information of tRNA gene sequence


Sequence ID>SRA1013782
Genome IDSRR023396.529512
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 123
End posion on genome 198
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
acaagaaaat
tRNA gene sequence 
GGCGAGGTAGCTCAGTCGGTAGAGCGAGAGACTGAAAATCTCTGCGTCGGCGGTTCGATT
CCGTCCCTCGCCACAA
Downstream region at tRNA end position 
tccttatttc
Secondary structure (Cloverleaf model)
>SRA1013782	Phe	GAA
                   t      ACAA tccttatttc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C T G C C     A
      T G A        A      | + | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     GCGTC
                    A - T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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