The detailed information of tRNA gene sequence


Sequence ID>SRA1013785
Genome IDSRR023396.534897
Search identical group
Phylum/ClassBrazos-Trinity Basin Sediment Metagenome: IODP Site 1320 (SRP001095)
Species
Start position on genome 17
End posion on genome 92
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tatcgaacag
tRNA gene sequence 
GCCCACGTAGCTCAGGCGGTAGAGCACATTCTTGGTAAGAATGCGGTCCCCGGTTCAAGT
CCGGGCGTGGGCTCCA
Downstream region at tRNA end position 
taagcgaaag
Secondary structure (Cloverleaf model)
>SRA1013785	Thr	GGT
                   g      TCCA taagcgaaag
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T G
                    T     G G G C C     A
      G G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    C - G
                    A - T
                    T - A
                    T - A
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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