The detailed information of tRNA gene sequence


Sequence ID>SRA1013927
Genome IDSRR023820.42632
Search identical group
Phylum/ClassPru Toh Daeng peat swamp (SRP001114)
Species
Start position on genome 64
End posion on genome 157
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgattcgcc
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAACCGTTGTACTGGCTAAAACC
GGTACCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
gattctttgg
Secondary structure (Cloverleaf model)
>SRA1013927	Ser	GCT
                   c      GCCA gattctttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTACTGGCTAAAACCGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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