The detailed information of tRNA gene sequence


Sequence ID>SRA1013946
Genome IDSRR023821.1682
Search identical group
Phylum/ClassPru Toh Daeng peat swamp (SRP001114)
Species
Start position on genome 168
End posion on genome 244
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tcctgaaccc
tRNA gene sequence 
GGGCTAGTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAGGTTCAAA
TCCTCCCTGGCCCACCA
Downstream region at tRNA end position 
ccgaacgnnn
Secondary structure (Cloverleaf model)
>SRA1013946	Ile	GAT
                   c      ACCA ccgaacgnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     G - C          T A
                    T     C C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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