The detailed information of tRNA gene sequence


Sequence ID>SRA1014107
Genome IDSRR023845.2023
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 196
End posion on genome 112
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
acccgccgct
tRNA gene sequence 
GCCCCTGTGGCGAAATTGGTAGACGCGACCGACTCAAAATCGGTTGCCGCAAGGCATGCT
GGTTCGATTCCGGCCAGGGGCACCA
Downstream region at tRNA end position 
ccgcacttcg
Secondary structure (Cloverleaf model)
>SRA1014107	Leu	CAA
                   t      ACCA ccgcacttcg
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | + | |     G
    T       A G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCGCAAGGCAT
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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