The detailed information of tRNA gene sequence


Sequence ID>SRA1014117
Genome IDSRR023845.6946
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 50
End posion on genome 133
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tcgtgttttt
tRNA gene sequence 
GCCGGGATGGCGGAATGGTAGACGCGATGGTCTCAAACACCTTTGTCTGCAAGGACATGC
CGGTTCGAGTCCGGCTCCCGGTACat
Downstream region at tRNA end position 
atagatcctc
Secondary structure (Cloverleaf model)
>SRA1014117	Leu	CAA
                   t      ACat atagatcctc
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    G       G G C G       G C C G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGTCTGCAAGGACAT
                    A - T
                    T   T
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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