The detailed information of tRNA gene sequence


Sequence ID>SRA1014138
Genome IDSRR023845.14310
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 130
End posion on genome 54
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
cagcgggtgt
tRNA gene sequence
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCTAGGCCCACCA
Downstream region at tRNA end position
cacacaagtg
Secondary structure (Cloverleaf model)
>SRA1014138	Ile	GAT
                   t      ACCA cacacaagtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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