The detailed information of tRNA gene sequence


Sequence ID>SRA1014146
Genome IDSRR023845.18966
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 30
End posion on genome 106
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgctgcgcct
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTCAGAGCGCCGGTCTCCAAAACCGGAGGTTGCGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
cttggcggct
Secondary structure (Cloverleaf model)
>SRA1014146	Trp	CCA
                   t      GCCA cttggcggct
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C A A        A      |   | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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