The detailed information of tRNA gene sequence


Sequence ID>SRA1014166
Genome IDSRR023845.23678
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 111
End posion on genome 37
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ccggcaccgc
tRNA gene sequence 
GCTGCGGTAGCTCAGTGGTAGAGCACCTCATTGGTAATGAGGAGGTCGAGAGTTCAATCC
TCTCTCGCAGCACCA
Downstream region at tRNA end position 
tttaccccct
Secondary structure (Cloverleaf model)
>SRA1014166	Thr	GGT
                   c      ACCA tttaccccct
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C
                     G + T          C T
                    T     C T C T C     A
        G A        A      | | | | |     A
      T     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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