The detailed information of tRNA gene sequence


Sequence ID>SRA1014179
Genome IDSRR023845.29693
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 148
End posion on genome 220
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggtgcaggga
tRNA gene sequence 
TTCTCGTTAGTATAGTGGTTAGTATACCCGCCTGTCACGCGGGTGACCCGGGTTCAATTC
CCGGACGGGAAGCtt
Downstream region at tRNA end position 
ttgctctttt
Secondary structure (Cloverleaf model)
>SRA1014179	Asp	GTC
                   a      GCtt ttgctctttt
                     T - A
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C
                     T - A          T T
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C C G G G     C
    G       + | | +                 T T
    T       G T A T
      T A          A     TGAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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