The detailed information of tRNA gene sequence


Sequence ID>SRA1014190
Genome IDSRR023845.33418
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 44
End posion on genome 134
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agggcttcgc
tRNA gene sequence 
GGAGCGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGAGGGTTAACAGCCC
TCCGCGGGTTCGAATCCCGCCTGCTCCGCCA
Downstream region at tRNA end position 
agtcagtcca
Secondary structure (Cloverleaf model)
>SRA1014190	Ser	GGA
                   c      GCCA agtcagtcca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGAGGGTTAACAGCCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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