The detailed information of tRNA gene sequence


Sequence ID>SRA1014197
Genome IDSRR023845.35526
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 262
End posion on genome 188
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
acaagtgtac
tRNA gene sequence 
GCGCCCTTCGTCTATCGGTTAGGACGTCAGATTTTCATTCTGAAAAGAGGGGTTCGACTC
CCCTAGGGCGTACCA
Downstream region at tRNA end position 
cttgagtgtt
Secondary structure (Cloverleaf model)
>SRA1014197	Glu	TTC
                   c      ACCA cttgagtgtt
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T C
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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