The detailed information of tRNA gene sequence


Sequence ID>SRA1014199
Genome IDSRR023845.36176
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 49
End posion on genome 135
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gcgtgggttg
tRNA gene sequence 
GCCAGTGTCGGATAGCGGTCGATTCCGCCTGATTTGTAATCAGGATGCGCAAGCGCGTCG
GGGGTTCGAATCCCTCCACTGGCTCTA
Downstream region at tRNA end position 
gtaaaaatgc
Secondary structure (Cloverleaf model)
>SRA1014199	Thr	TGT
                   g      TCTA gtaaaaatgc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    G       T A G G       G G G G G     C
    G         | | |                 T T
    T       T T C C
      C G A        G     ATGCGCAAGCGCGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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