The detailed information of tRNA gene sequence


Sequence ID>SRA1014204
Genome IDSRR023845.38072
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 65
End posion on genome 140
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccaccggaa
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCCGGCGGCTCATAACCGCTTGGTTGGGAGTTCGAGT
CTCTCCGGGCCCACCA
Downstream region at tRNA end position 
catcattttc
Secondary structure (Cloverleaf model)
>SRA1014204	Met	CAT
                   a      ACCA catcattttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G A G     C
    G       | | | |                 T T
    T       G A G C
      T A          C     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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