The detailed information of tRNA gene sequence


Sequence ID>SRA1014213
Genome IDSRR023845.41383
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 255
End posion on genome 179
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
nncgaggcgc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCGAA
TCCACCCAGGCCCACCA
Downstream region at tRNA end position 
ctttcgcgct
Secondary structure (Cloverleaf model)
>SRA1014213	Ile	GAT
                   c      ACCA ctttcgcgct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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