The detailed information of tRNA gene sequence


Sequence ID>SRA1014221
Genome IDSRR023845.43930
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 167
End posion on genome 239
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtgtcagtga
tRNA gene sequence 
GTCAGTGTCGTCTAGTGGTTAGGACGCGAGCTTCACACGCTCGAGATCGAGGGTTCGATC
CCCTCCTCTGATAtct
Downstream region at tRNA end position 
tctttgctct
Secondary structure (Cloverleaf model)
>SRA1014221	Val	CAC
                   a      Atct tctttgctct
                     G + T
                     T - A
                     C - G
                     A - T
                     G - C
                     T   T
                     G - C          C T
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G A G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AGATC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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