The detailed information of tRNA gene sequence


Sequence ID>SRA1014223
Genome IDSRR023845.44619
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 82
End posion on genome 6
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagcaagttt
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCCGGTTCAAG
TCCGGTCAGGGTCGCCA
Downstream region at tRNA end position 
aggcannnnn
Secondary structure (Cloverleaf model)
>SRA1014223	Asp	GTC
                   t      GCCA aggcannnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G G C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C C G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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