The detailed information of tRNA gene sequence


Sequence ID>SRA1014231
Genome IDSRR023845.47217
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 223
End posion on genome 147
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttgcggtcaa
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAA
TCCTGCCGCTCCGACCA
Downstream region at tRNA end position 
tctcacagga
Secondary structure (Cloverleaf model)
>SRA1014231	Pro	TGG
                   a      ACCA tctcacagga
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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