The detailed information of tRNA gene sequence


Sequence ID>SRA1014234
Genome IDSRR023845.48514
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 228
End posion on genome 144
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gtcgtcgctt
tRNA gene sequence 
GCGGGCGTGGCGGAACTGGTAGACGCGCTGGTTTTAGGTACCAGTGTCGCAAGACGTGGG
GGTTCGAGCCCCTCCGCCCGCACCA
Downstream region at tRNA end position 
gtccatcgcc
Secondary structure (Cloverleaf model)
>SRA1014234	Leu	TAG
                   t      ACCA gtccatcgcc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     C T C C C     A
      C A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCGCAAGACGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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