The detailed information of tRNA gene sequence


Sequence ID>SRA1014239
Genome IDSRR023845.50393
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 4
End posion on genome 78
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnnnnntgt
tRNA gene sequence 
TCCCTGATAGCTCAGCGGTAGAGCATTCGACTGTTAATCGAATGGCCGTAGGTTCGAATC
CTACTCAGGGAGCCA
Downstream region at tRNA end position 
gcgaccctcc
Secondary structure (Cloverleaf model)
>SRA1014239	Asn	GTT
                   t      GCCA gcgaccctcc
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     A - T          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGCC
                    T - A
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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