The detailed information of tRNA gene sequence


Sequence ID>SRA1014241
Genome IDSRR023845.51745
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 228
End posion on genome 152
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaccgtttT
tRNA gene sequence 
TGTAACGTAGCTCAATGGCTCCAAGAGCATCGGCTTGCTACGCCGGTGGCACAGGTTCAA
TTCCTGTCGTTTTGGAat
Downstream region at tRNA end position 
gaactcaacc
Secondary structure (Cloverleaf model)
>SRA1014241	Ser	GCT
                   T      GAat gaactcaacc
                     T + G
                     G + T
                     T   T
                     A - T
                     A - T
                     C - G
                     G - C          T T
                    T     T G T C C     A
    G T A A        A      | | | | |     A
  G         C T C G       A C A G G     C
  C         | | | |                 T T
  T         G A G C
    C C A A        A     TGGC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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