The detailed information of tRNA gene sequence


Sequence ID>SRA1014250
Genome IDSRR023845.56041
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 47
End posion on genome 133
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccaaagaaga
tRNA gene sequence 
GCCGGAGTGGTGGAATAGGTAGACACGCGGCACTTAAAATGCCGTTTCCGTAAGGAAGTA
CGGGTTCGATTCCCGTCTCTGGTACTA
Downstream region at tRNA end position 
ttaaagcccc
Secondary structure (Cloverleaf model)
>SRA1014250	Leu	TAA
                   a      ACTA ttaaagcccc
                     G + T
                     C - G
                     C - G
                     G + T
                     G - C
                     A - T
                     G - C          T T
                    T     T G C C C     A
      T A A        G      | | | | |     G
    A       G G T G       A C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TTTCCGTAAGGAAGT
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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