The detailed information of tRNA gene sequence


Sequence ID>SRA1014268
Genome IDSRR023845.66785
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 165
End posion on genome 257
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggctcgcacc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAACGCTTTGCTAAAGCGTCATACGGTCTCAAGCT
GTATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cccagcagca
Secondary structure (Cloverleaf model)
>SRA1014268	Ser	GCT
                   c      GCCA cccagcagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACGGTCTCAAGCTGTATC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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