The detailed information of tRNA gene sequence


Sequence ID>SRA1014284
Genome IDSRR023845.70653
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 115
End posion on genome 41
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccaccacgca
tRNA gene sequence 
GGCCCCTTCGTCTAGCGGTTAGGACGCGGCCCTTTCACGGCTGAAGCACGGGTTCGATTC
CCGTAGGGGTCACCA
Downstream region at tRNA end position 
tttgtgcttt
Secondary structure (Cloverleaf model)
>SRA1014284	Glu	TTC
                   a      ACCA tttgtgcttt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAGC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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