The detailed information of tRNA gene sequence


Sequence ID>SRA1014301
Genome IDSRR023845.80670
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 246
End posion on genome 160
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cggcctatct
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTAAAGGCAGCAGACTGTAAATCTGCCCGGGTTTCCCGTACG
CTGGTTCGAATCCAGCCCTGTCCACCA
Downstream region at tRNA end position 
aggcttcgcg
Secondary structure (Cloverleaf model)
>SRA1014301	Tyr	GTA
                   t      ACCA aggcttcgcg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T A A        A     CCGGGTTTCCCGTAC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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