The detailed information of tRNA gene sequence


Sequence ID>SRA1014324
Genome IDSRR023845.89083
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 227
End posion on genome 151
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgaccctgt
tRNA gene sequence 
GGCGGGGTAGCTCAGCTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCGAG
TCCCTCCCCCGCTACCA
Downstream region at tRNA end position 
taaagccgtt
Secondary structure (Cloverleaf model)
>SRA1014324	Met	CAT
                   t      ACCA taaagccgtt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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