The detailed information of tRNA gene sequence


Sequence ID>SRA1014335
Genome IDSRR023845.94105
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 29
End posion on genome 120
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gacagacacC
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGTACCTGACTCGAAATCAGGCGTACGTGCGAACGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGTCC
Downstream region at tRNA end position 
Aggaccggct
Secondary structure (Cloverleaf model)
>SRA1014335	Ser	CGA
                   C      GTCC Aggaccggct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | +                 T T
    T       A T G T
      C G A        A     CGTACGTGCGAACGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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