The detailed information of tRNA gene sequence


Sequence ID>SRA1014336
Genome IDSRR023845.94116
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 150
End posion on genome 225
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggcagcgtt
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCGTAGGTTCGAGC
CCTACTGCCCCTGCCA
Downstream region at tRNA end position 
gcccaaccgt
Secondary structure (Cloverleaf model)
>SRA1014336	Trp	CCA
                   t      GCCA gcccaaccgt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          C G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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