The detailed information of tRNA gene sequence


Sequence ID>SRA1014362
Genome IDSRR023845.104501
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 215
End posion on genome 120
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agattgaccc
tRNA gene sequence 
GGAAGAGAATCGTCCCCGGTGGGGCGTACGGACTTCAAATCCGTGTGGGGCCGTGAGACG
GTCCTTGGTGGGTTCGACTCCCACTCTCCTCCGCCA
Downstream region at tRNA end position 
tcctcccgtc
Secondary structure (Cloverleaf model)
>SRA1014362	SeC	TCA
                   c      GCCA tcctcccgtc
                     G - C
                     G - C
                     A - T
                     A   C
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          T     GTGGGGCCGTGAGACGGTCCTTG
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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