The detailed information of tRNA gene sequence


Sequence ID>SRA1014419
Genome IDSRR023845.131076
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 25
End posion on genome 119
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gtgttatggc
tRNA gene sequence 
GCCTCGATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATGTGAAGATGTGAAGATGTGAA
GGTCGGGTCCCTGGTTCGATCCCGGGTCGCGGCACtt
Downstream region at tRNA end position 
ttacacgcgg
Secondary structure (Cloverleaf model)
>SRA1014419	Phe	GAA
                   c      ACtt ttacacgcgg
                     G - C
                     C - G
                     C - G
                     T   C
                     C - G
                     G - C
                     A - T          C T
                    T     G G G C C     A
      T G A        A      | | + | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGATGTGAAGATGTGAAGGTCGGGTC
                    T - A
                    C - G
                    A - T
                    G   G
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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