The detailed information of tRNA gene sequence


Sequence ID>SRA1014424
Genome IDSRR023845.132319
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 115
End posion on genome 205
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cactttctgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGACGCTGCACTCGAAATGCAGTGTACGGGAAACCGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcaagtccta
Secondary structure (Cloverleaf model)
>SRA1014424	Ser	CGA
                   c      GCCA gcaagtccta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  T         +     |                 T T
  C         T G A C
    G A A          G     TGTACGGGAAACCGTACC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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