The detailed information of tRNA gene sequence


Sequence ID>SRA1014447
Genome IDSRR023845.146041
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 51
End posion on genome 140
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gacccgcgac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATACCGGAGACGGTA
TCGTGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
tcgcagcgtc
Secondary structure (Cloverleaf model)
>SRA1014447	Ser	GCT
                   c      GCCA tcgcagcgtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCGGAGACGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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