The detailed information of tRNA gene sequence


Sequence ID>SRA1014457
Genome IDSRR023845.149036
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 199
End posion on genome 272
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atcgtagcaa
tRNA gene sequence 
GTTCGGATGGTGTAGTTGGTTATCACGCGCGCCTCACACGCGCGAGGTCCCGAGTTCGAT
CCTCGGTTCGAACAagn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1014457	Val	CAC
                   a      Aagn nnnnnnnnnn
                     G - C
                     T - A
                     T - A
                     C - G
                     G - C
                     G + T
                     A - T          C T
                    T     G G C T C     A
      T G A        G      | | | | |     G
    T       T G T G       C C G A G     C
    G         | | |                 T T
    G       T C A C
      T T A        G     AGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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