The detailed information of tRNA gene sequence


Sequence ID>SRA1014478
Genome IDSRR023845.157063
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 135
End posion on genome 211
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaacacccg
tRNA gene sequence 
AGCGGGGTGGCGCAGTTCGGTAGCGCAGGTGGCTCATAACCATCAGGTCGTCGGTTCAAA
TCCGACCCCCGCCACCA
Downstream region at tRNA end position 
ccccaccacg
Secondary structure (Cloverleaf model)
>SRA1014478	Met	CAT
                   g      ACCA ccccaccacg
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     A
    T       C G C G       G T C G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    G - C
                    G + T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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