The detailed information of tRNA gene sequence


Sequence ID>SRA1014485
Genome IDSRR023845.160085
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 133
End posion on genome 61
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actcagcttg
tRNA gene sequence 
ACCTACTTGACTCAGCGGTTAGAGTATCGCTTTCATACGGCGAGAGTCATTGGTTCAAAT
CCAATAGTAGGTAagg
Downstream region at tRNA end position 
ccgaaagccc
Secondary structure (Cloverleaf model)
>SRA1014485	Met	CAT
                   g      Aagg ccgaaagccc
                     A - T
                     C - G
                     C - G
                     T - A
                     A - T
                     C - G
                     T - A          T A
                    T     T A A C C     A
      C G A        G      | | | | |     A
    G       C T C A       A T T G G     C
    G       | | | |                 T T
    T       G A G T
      T A          A     GAGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    T + G
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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