The detailed information of tRNA gene sequence


Sequence ID>SRA1014487
Genome IDSRR023845.160524
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 5
End posion on genome 79
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
nnnnnntcac
tRNA gene sequence 
GCTCCCTTCGTCTAGCGGTTAGGACGCGGCCCTCTCAAGGCTGAAACAGGGGTTCGATTC
CCCTAGGGAGCGCCA
Downstream region at tRNA end position 
aatccaagat
Secondary structure (Cloverleaf model)
>SRA1014487	Glu	CTC
                   c      GCCA aatccaagat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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