The detailed information of tRNA gene sequence


Sequence ID>SRA1014509
Genome IDSRR023845.172785
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 183
End posion on genome 110
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgcccaagcc
tRNA gene sequence 
GGTAACGTGACCGAGCGGCTAGGTAGAGGTCTGCAAAACCTCCTACGGCGGTTCGAATCC
GCCCGTTACCTCAA
Downstream region at tRNA end position 
ttaagtactc
Secondary structure (Cloverleaf model)
>SRA1014509	Cys	GCA
                   c      TCAA ttaagtactc
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C C G C C     A
        G A        G      | | | | |     G
      C     G C C A       G G C G G     C
      G       | | |                 T T
      G     A G G T
        C T        A     CTAC
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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