The detailed information of tRNA gene sequence


Sequence ID>SRA1014516
Genome IDSRR023845.175045
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 122
End posion on genome 49
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggcgagcctc
tRNA gene sequence 
GCCGGCCTGGCGCAATTGGTAGCGCATCCGACTTGTAATCGGAAGGTTACGGGTTCAAGT
CCCGTGGCCGGCTCtc
Downstream region at tRNA end position 
ttctcccgcc
Secondary structure (Cloverleaf model)
>SRA1014516	Thr	TGT
                   c      TCtc ttctcccgcc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G          T G
                    T     T G C C C     A
      T A A        G      | | | | |     A
    T       C G C G       A C G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     AGGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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