The detailed information of tRNA gene sequence


Sequence ID>SRA1014531
Genome IDSRR023845.186472
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 49
End posion on genome 145
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgcggctcaa
tRNA gene sequence 
CGGAAGGAAATCGTCCCTGGTGGGGCGGCTGGGCTTCAAACCCAGTTGGTGGCGCCATGC
GTCGCCGGGTGGGTTCGACTCCCGCATCCTTCCGCCAt
Downstream region at tRNA end position 
cctttctgtt
Secondary structure (Cloverleaf model)
>SRA1014531	SeC	TCA
                   a      CCAt cctttctgtt
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          C T
                    A     A C G C C     C
      C C C        A      | |   |       A
    T       T G C T       T G G G T     G
    G       +     +                 T C
    G       G G C G
      T G G        G     TTGGTGGCGCCATGCGTCGCCGGG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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