The detailed information of tRNA gene sequence


Sequence ID>SRA1014545
Genome IDSRR023845.192877
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 33
End posion on genome 115
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cttccgaatc
tRNA gene sequence 
GCGGGCGTGGCGAAATTGGTAGACGTGCCAGACTTAGGATCTGGTGCCGCAAGGCATGGG
GGTTCGAGTCCCTCCGCCCGTACag
Downstream region at tRNA end position 
tgtttacaat
Secondary structure (Cloverleaf model)
>SRA1014545	Leu	TAG
                   c      ACag tgtttacaat
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       A G C G       G G G G G     C
    G         | | +                 T T
    G       A C G T
      T A G        G     TGCCGCAAGGCAT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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