The detailed information of tRNA gene sequence


Sequence ID>SRA1014590
Genome IDSRR023845.214899
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 147
End posion on genome 223
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggatcggtac
tRNA gene sequence 
GGCGAAGTAGCTCAGCTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCAAG
TCCCTCCTTCGCTACCA
Downstream region at tRNA end position 
tttgcaacca
Secondary structure (Cloverleaf model)
>SRA1014590	Met	CAT
                   c      ACCA tttgcaacca
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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