The detailed information of tRNA gene sequence


Sequence ID>SRA1014605
Genome IDSRR023845.223015
Search identical group
Phylum/ClassCommunity proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)
Species
Start position on genome 172
End posion on genome 91
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccaagaaaa
tRNA gene sequence 
GACAACGTGGCCGAGTGGTTAAGGCGTCAGCCTGCTAAGTTGATGGGCTTTGCCCGCGTG
GGTTCAAATCCCACCGTTGTCGaat
Downstream region at tRNA end position 
tcatttttat
Secondary structure (Cloverleaf model)
>SRA1014605	Ser	GCT
                   a      Gaat tcatttttat
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTTTGCCCGC
                    T - A
                    C - G
                    A - T
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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